Read .vcf structured text format files and reduce the size of file.

Read .vcf structured text format files and reduce the size of file.

Usage

build_phase(phased_vcf = "name.vcf", caco)

Arguments

phased_vcf

A file name for a variant call format (vcf) file.

caco

An object of class caco. Output of case_control function.

Value

the output will be a a list of class phase contains two sparse matrix for each haplotype.